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2008 Archive, Vol. 5, No. 2


Mining Protein Database using Machine Learning Techniques

Renata da Silva Camargo and Mahesan Niranjan
2008-08-25, IB08 Article

Discovering Distinct Patterns in Gene Expression Profiles

Li Teng and Laiwan Chan
2008-08-25, IB08 Article

GOblet: Annotation of anonymous sequence data with Gene Ontology and Pathway terms

Detlef Groth, Stefanie Hartmann, Georgia Panopoulou, Albert J. Poustka and Steffen Hennig
2008-08-25, IB08 Article

An Unusal Distribution of 6-nt Sequences Near The Transcription Start Site

Chanchal K. Mitra and Luciano Milanesi
2008-08-25, IB08 Article

ReMatch: a web-based tool to construct, store and share stoichiometric metabolic models with carbon maps for metabolic flux analysis

Esa Pitkänen, Arto Åkerlund, Ari Rantanen, Paula Jouhten and Esko Ukkonen
2008-08-25, IB08 Article

Integrative Visual Analysis of the Effects of Alternative Splicing on Protein Domain Interaction Networks

Dorothea Emig, Melissa S. Cline, Karsten Klein, Anne Kunert, Petra Mutzel, Thomas Lengauer and Mario Albrecht
2008-08-25, IB08 Article

Subgraph Queries by Context-free Grammars

Petteri Sevon and Lauri Eronen
2008-08-25, IB08 Article

A Bayes Random Field Approach for Integrative Large-Scale Regulatory Network Analysis

Yinyin Yuan and Chang-Tsun Li
2008-08-25, Research Article

Widespread existence of uncorrelated probe intensities from within the same probeset on Affymetrix GeneChips

Olivia Sanchez-Graillet, Joanna Rowsell, William B. Langdon, Maria Stalteri, Jose M. Arteaga-Salas, Graham J.G. Upton and Andrew P. Harrison
2008-08-25, IB08 Article

Visual Comparison of Multiple Gene Expression Datasets in a Genomic Context

Krzysztof Borowski, Jung Soh and Christoph W. Sensen
2008-08-25, IB08 Article

Effectiveness of Closure of Public Places with Time Delay in Disease Control

Zhenggang Wang, Kwok Yip Szeto and Frederick Chi-Ching Leung
2008-08-25, IB08 Article

Converting Biomolecular Modelling Data Based on an XML Representation

Yudong Sun and Steve McKeever
2008-08-25, IB08 Article

Graph-based sequence annotation using a data integration approach

Robert Pesch, Artem Lysenko, Matthew Hindle, Keywan Hassani-Pak, Ralf Thiele, Christopher Rawlings, Jacob Köhler and Jan Taubert
2008-08-25, IB08 Article

BioDWH: A Data Warehouse Kit for Life Science Data Integration

Thoralf Töpel, Benjamin Kormeier, Andreas Klassen and Ralf Hofestädt
2008-08-25, IB08 Article

MoRAine - A web server for fast computational transcription factor binding motif re-annotation

Jan Baumbach, Tobias Wittkop, Jochen Weile, Thomas Kohl and Sven Rahmann
2008-08-25, IB08 Article

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