SABIO-RK: A data warehouse for biochemical reactions and their kinetics

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doi doi:10.2390/biecoll-jib-2007-49
submission November 15, 2006
published January 31, 2007

Olga Krebs, Martin Golebiewski, Renate Kania, Saqib Mir, Jasmin Saric, Andreas Weidemann, Ulrike Wittig and Isabel Rojas

Correspondence should be addressed to:
Olga Krebs
EML Research, Schloss-Wolfsbrunnenweg 33, D-69118 Heidelberg, Germany
ed.hcsob-alliv.r-lme@nullsberK.aglO


Abstract

Systems biology is an emerging field that aims at obtaining a system-level understanding of biological processes. The modelling and simulation of networks of biochemical reactions have great and promising application potential but require reliable kinetic data. In order to support the systems biology community with such data we have developed SABIO-RK (System for the Analysis of biochemical Pathways - Reaction Kinetics), a curated database with information about biochemical reactions and their kinetic properties, which allows researchers to obtain and compare kinetic data and to integrate them into models of biochemical networks. SABIO-RK is freely available for academic use at http://sabio.villa-bosch.de/SABIORK/.

Reference

Olga Krebs, Martin Golebiewski, Renate Kania, Saqib Mir, Jasmin Saric, Andreas Weidemann, Ulrike Wittig and Isabel Rojas. SABIO-RK: A data warehouse for biochemical reactions and their kinetics. Journal of Integrative Bioinformatics, 4(1):49, 2007. Online Journal: http://journal.imbio.de/index.php?paper_id=49
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